PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.4P1MR
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 393aa    MW: 42849.8 Da    PI: 6.1892
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.4P1MRgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.33.7e-10240288355
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   +h+ +Er RR++i +++  L+el+P +    +k   Ka +L + ++Y++sLq
  Aradu.4P1MR 240 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 288
                  58**************************....999*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.34E-11235292No hitNo description
SuperFamilySSF474596.02E-17235304IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.485237287IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-16238305IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.4E-7240288IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-10243293IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009637Biological Processresponse to blue light
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    Send to blast
MSSDVENAMR LQQEEKKGIL MSCPSSLGLG TSGSEMASSN SEPSNVANPF LASSAWDPLT  60
PLTQLQTTNT TTLVGDPSTS SIPIPIPMVS HHNNEFSNSL LYTLVLENQQ APHIVQYMSR  120
DMVPIPKVQV PVSYGSGSFS EMVGSFLQSP NSEHSQGEGE GEDSGSAPSG NRRRKRGHEH  180
NNNSTFSPNK NAEDCSGKRK NQDDEKKAKV EENKDKSGQS GETPKENFIH VRARRGQATN  240
SHSLAERVRR EKISERMRLL QELVPGCNKI TGKAVMLDEI INYVQSLQQQ VEFLSMKLAT  300
VNPELNLDLE RILSKDILQS RIGGYGGGIS CSQAFPSSSF QGTLVPMPTT SNQLPPLPQS  360
LLDHEFQNLY GMSYDSSTAL GNMGHNGGSK PEL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00135DAPTransfer from AT1G10120Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015935107.10.0PREDICTED: transcription factor bHLH74-like
TrEMBLV7CU851e-138V7CU85_PHAVU; Uncharacterized protein
STRINGGLYMA14G10180.11e-136(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75853345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.14e-67bHLH family protein